César Miguel Valdez Córdova

PhD Student, Quantitative Life Sciences, Mila/McGill University

I study how structure emerges in learning systems, both biological and artificial. When we apply methods like dimensionality reduction or train neural networks on data, we're making implicit choices about what patterns matter. I'm interested in understanding how the shape of the data itself, its underlying geometry, guides these discoveries. I'm developing tools and frameworks for agentic AI systems that can reason geometrically about scientific data, learning to make principled analytical choices based on the intrinsic structure of the systems they're analyzing.

01

Publications

César Miguel Valdez Córdova, et al. UniReps/NeurReps @ NeurIPS 2025
Matthew Scicluna, Shuang Ni, César Miguel Valdez Córdova, Jean-Christophe Grenier, Raphael Poujol, Kevin R. Moon, Guy Wolf, Sebastien Lemieux, Smita Krishnaswamy, Julie Hussin. ASHG 2025
A Wenteler, M Occhetta, N Branson, M Huebner, V Curean, WT Dee, ... César Miguel Valdez Córdova (supervising author), et al. ICML 2025
Lucas Ferreira DaSilva, Simon Senan, Zain Munir Patel, ... César Miguel Valdez Córdova, Aaron Wenteler, ... Luca Pinello, et al. Nature Genetics (2025)
César Miguel Valdez Córdova. LatinX in AI (LXAI) @ ICML 2024
02

Open Source

Founder, Lead Developer
Developing frameworks for geometrically intelligent agentic systems. Building tools for reasoning about manifold structure and guiding scientific discovery through geometric profiling and principled workflow selection.
Contributor
Contributed to the development of Mila's official research template. Built the NLP module, remote launching with submitit/hydra, and code profiling infrastructure for seamless interaction with SLURM-managed cluster computing.
03

Reviewing

2026
  • Learning Meaningful Representations of Life (LMRL) @ ICLR
  • Geometry-grounded Representation Learning and Generative Modelling (GRaM) @ ICLR
2025
  • UniReps @ NeurIPS
  • Constrained Optimization for ML (COML) @ NeurIPS
  • NewinML @ ICML
  • Learning Meaningful Representations of Life (LMRL) @ ICLR
04

Outreach & Community

Mila, 2024–Present
Organized and moderated weekly reading group exploring representation learning in biological systems. Open to researchers worldwide, covering foundational papers and emerging work in computational biology.
McGill University, 2024–Present
Designed bioinformatics workshop materials, directed qualified instructors, organized and supervised workshop delivery. Conducted code reviews for workshop materials. Coordinated fundraising efforts to support computational medicine initiatives.
Mila, 2023–2025
Selected as Laboratory Representative (LabRep) to facilitate communication between students, postdocs, faculty, and staff. Organized assemblies, surveyed students on concerns, tracked proposals through to completion to enhance student involvement in decision-making.
05

Education

Ph.D. in Quantitative Life Sciences
McGill University, Montréal, Québec, Canada (Sept. 2023 – Present)
M.Sc. in Artificial Intelligence (Life Sciences Track)
Johannes Kepler Universität Linz, Upper Austria, Austria (Grad. 2024)
Exchange semester at Polytechnique Montréal, Québec, Canada
M.Sc. in Computer Science
Ensenada Center for Scientific Research and Higher Education (CICESE), Baja California, México (Grad. 2020)
B.Sc. in Chemistry and Nanotechnology Engineering
Tec de Monterrey, Campus Monterrey, Nuevo León, México (Grad. 2016)
06

Affiliations

Current

PhD Student, Quantitative Life Sciences, Mila/McGill University

Future Forged Research Fellow (Biology), Amii (Alberta Machine Intelligence Institute)

Advisors

Guy Wolf, Université de Montréal & Mila

Mathieu Blanchette, McGill University & Mila

Thesis Committee

Doina Precup, McGill University & Mila

Smita Krishnaswamy, Yale University & Mila

Luca Pinello, Massachusetts General Hospital & Harvard Medical School